Tutorials

How to run these examples

Each of the following examples can be run by clicking on the green source button
on the right side of each example, and running from within a ``.py`` python file
on a computer where moose is installed.

Alternatively, all the files mentioned on this page can be found in the main
moose directory. They can be found under

    (...)/moose/moose-examples/snippets

They can be run by typing

    $ python filename.py

in your command line, where filename.py is the python file you want to run.

All of the following examples show one or more methods within each python file.
For example, in the ``cubeMeshSigNeur`` section, there are two blue tabs
describing the ``cubeMeshSigNeur.createSquid()`` and ``cubeMeshSigNeur.main()``
methods.

The filename is the bit that comes before the ``.`` in the blue boxes, with
``.py`` added at the end of it. In this case, the file name would be
``cubeMeshSigNeur.py``.

Network with Ca-based plasticity

GraupnerBrunel2012_STDPfromCaPlasticity.main()

Simulate a pseudo-STDP protocol and plot the STDP kernel that emerges from Ca plasticity of Graupner and Brunel 2012.

Author: Aditya Gilra, NCBS, Bangalore, October, 2014.

HigginsGraupnerBrunel2014_LifetimeCaPlasticity.main()

Simulate pre and post Poisson firing for a synapse with Ca plasticity of Graupner and Brunel 2012. See the trace over time (lifetime) for the synaptic efficacy, similar to figure 2A of Higgins, Graupner, Brunel, 2014.

Author: Aditya Gilra, NCBS, Bangalore, October, 2014.