CaConcBase

class CaConcBase

CaConcBase: Base class for Calcium concentration pool. Takes current from a channel and keeps track of calcium buildup and depletion by a single exponential process.

proc

void (shared message field) Shared message to receive Process message from scheduler

process()

(destination message field) Handles process call

reinit()

(destination message field) Handles reinit call

setCa()

(destination message field) Assigns field value.

getCa()

(destination message field) Requests field value. The requesting Element must provide a handler for the returned value.

setCaBasal()

(destination message field) Assigns field value.

getCaBasal()

(destination message field) Requests field value. The requesting Element must provide a handler for the returned value.

setCa_base()

(destination message field) Assigns field value.

getCa_base()

(destination message field) Requests field value. The requesting Element must provide a handler for the returned value.

setTau()

(destination message field) Assigns field value.

getTau()

(destination message field) Requests field value. The requesting Element must provide a handler for the returned value.

setB()

(destination message field) Assigns field value.

getB()

(destination message field) Requests field value. The requesting Element must provide a handler for the returned value.

setThick()

(destination message field) Assigns field value.

getThick()

(destination message field) Requests field value. The requesting Element must provide a handler for the returned value.

setDiameter()

(destination message field) Assigns field value.

getDiameter()

(destination message field) Requests field value. The requesting Element must provide a handler for the returned value.

setLength()

(destination message field) Assigns field value.

getLength()

(destination message field) Requests field value. The requesting Element must provide a handler for the returned value.

setCeiling()

(destination message field) Assigns field value.

getCeiling()

(destination message field) Requests field value. The requesting Element must provide a handler for the returned value.

setFloor()

(destination message field) Assigns field value.

getFloor()

(destination message field) Requests field value. The requesting Element must provide a handler for the returned value.

current()

(destination message field) Calcium Ion current, due to be converted to conc.

currentFraction()

(destination message field) Fraction of total Ion current, that is carried by Ca2+.

increase()

(destination message field) Any input current that increases the concentration.

decrease()

(destination message field) Any input current that decreases the concentration.

basal()

(destination message field) Synonym for assignment of basal conc.

concOut

double (source message field) Concentration of Ca in pool

Ca

double (value field) Calcium concentration.

CaBasal

double (value field) Basal Calcium concentration.

Ca_base

double (value field) Basal Calcium concentration, synonym for CaBasal

tau

double (value field) Settling time for Ca concentration

B

double (value field) Volume scaling factor. Deprecated. This is a legacy field from GENESIS and exposes internal calculations. Please do not use. B = 1/(vol * F) so that it obeys: dC/dt = B*I_Ca - C/tau

thick

double (value field) Thickness of Ca shell, assumed cylindrical. Legal range is between zero and the radius. If outside this range it is taken as the radius. Default zero, ie, the shell is the entire thickness of the cylinder

diameter

double (value field) Diameter of Ca shell, assumed cylindrical

length

double (value field) Length of Ca shell, assumed cylindrical

ceiling

double (value field) Ceiling value for Ca concentration. If Ca > ceiling, Ca = ceiling. If ceiling <= 0.0, there is no upper limit on Ca concentration value.

floor

double (value field) Floor value for Ca concentration. If Ca < floor, Ca = floor