EndoMesh Member List

This is the complete list of members for EndoMesh, including all inherited members.

addRow(unsigned int index, const vector< double > &entry, const vector< unsigned int > &colIndex)	MeshCompt
aPower_	EndoMesh	private
aScale_	EndoMesh	private
buildDefaultMesh(const Eref &e, double volume, unsigned int numEntries)	ChemCompt
buildJunction(ChemCompt *other, vector< VoxelJunction > &ret)	ChemCompt
ChemCompt()	ChemCompt
clearExtendedMeshEntryVolume()	MeshCompt	virtual
distance(double x, double y, double z)	ChemCompt	static
doAxialDiffusion_	EndoMesh	private
EndoMesh()	EndoMesh
extendedMeshEntryVolume(unsigned int fid) const	EndoMesh	virtual
extendStencil(const ChemCompt *other, const vector< VoxelJunction > &vj)	MeshCompt	virtual
flipRet(vector< VoxelJunction > &ret) const	ChemCompt
getApower(const Eref &e) const	EndoMesh
getAscale(const Eref &e) const	EndoMesh
getChildConcs(const Eref &e, vector< double > &childConcs) const	ChemCompt
getCoordinates(unsigned int fid) const	EndoMesh	virtual
getDiffusionArea(unsigned int fid) const	EndoMesh	virtual
getDiffusionScaling(unsigned int fid) const	EndoMesh	virtual
getDimensions() const	ChemCompt
getDoAxialDiffusion(const Eref &e) const	EndoMesh
getEntireVolume(const Eref &e) const	ChemCompt
getIsMembraneBound() const	ChemCompt
getMeshDimensions(unsigned int fid) const	EndoMesh	virtual
getMeshEntryVolume(unsigned int fid) const	EndoMesh	virtual
getMeshType(unsigned int fid) const	EndoMesh	virtual
getMethod() const	ChemCompt
getNeighbors(unsigned int fid) const	MeshCompt	virtual
getNumEntries() const	ChemCompt
getOneVoxelVolume(const Eref &e, unsigned int voxel) const	ChemCompt
getParentVoxel() const	EndoMesh	virtual
getRpower(const Eref &e) const	EndoMesh
getRscale(const Eref &e) const	EndoMesh
getStencil() const	MeshCompt
getStencilIndex(unsigned int row) const	ChemCompt
getStencilRate(unsigned int row) const	ChemCompt
getStencilRow(unsigned int meshIndex, const double **entry, const unsigned int **colIndex) const	MeshCompt	virtual
getSurround(const Eref &e) const	EndoMesh
getVoxelArea() const	EndoMesh	virtual
getVoxelLength() const	EndoMesh	virtual
getVoxelMidpoint() const	ChemCompt
getVoxelVolume() const	ChemCompt
getVpower(const Eref &e) const	EndoMesh
getVscale(const Eref &e) const	EndoMesh
handleNodeInfo(const Eref &e, unsigned int numNodes, unsigned int numThreads)	ChemCompt
indexToSpace(unsigned int index, double &x, double &y, double &z) const	EndoMesh	virtual
initCinfo()	EndoMesh	static
innerBuildDefaultMesh(const Eref &e, double volume, unsigned int numEntries)	EndoMesh	virtual
innerGetDimensions() const	EndoMesh	virtual
innerGetNumEntries() const	EndoMesh	virtual
innerGetStencilRate(unsigned int row) const	MeshCompt	virtual
innerHandleNodeInfo(const Eref &e, unsigned int numNodes, unsigned int numThreads)	EndoMesh	virtual
innerHandleRequestMeshStats(const Eref &e, const SrcFinfo2< unsigned int, vector< double > > *meshStatsFinfo)	EndoMesh
innerResetStencil()	MeshCompt	virtual
innerSetNumEntries(unsigned int n)	EndoMesh	virtual
insideMeshes_	EndoMesh	private
lookupEntry(unsigned int index)	ChemCompt
matchMeshEntries(const ChemCompt *other, vector< VoxelJunction > &ret) const	EndoMesh	virtual
MeshCompt()	MeshCompt
nearest(double x, double y, double z, unsigned int &index) const	EndoMesh	virtual
parent_	EndoMesh	private
resetStencil()	ChemCompt
rPower_	EndoMesh	private
rScale_	EndoMesh	private
setApower(const Eref &e, double v)	EndoMesh
setAscale(const Eref &e, double v)	EndoMesh
setChildConcs(const Eref &e, const vector< double > &childConcs, unsigned int start) const	ChemCompt
setDoAxialDiffusion(const Eref &e, bool v)	EndoMesh
setEntireVolume(const Eref &e, double volume)	ChemCompt
setIsMembraneBound(bool v)	ChemCompt
setMeshEntryVolume(unsigned int fid, double volume)	ChemCompt	virtual
setMethod(string method)	ChemCompt
setNumEntries(unsigned int num)	ChemCompt
setOneVoxelVolume(const Eref &e, unsigned int voxel, double volume)	ChemCompt
setRpower(const Eref &e, double v)	EndoMesh
setRscale(const Eref &e, double v)	EndoMesh
setStencilSize(unsigned int numRows, unsigned int numCols)	MeshCompt
setSurround(const Eref &e, ObjId v)	EndoMesh
setVolumeNotRates(double volume)	ChemCompt
setVpower(const Eref &e, double v)	EndoMesh
setVscale(const Eref &e, double v)	EndoMesh
surround_	EndoMesh	private
vGetEntireVolume() const	EndoMesh	virtual
vGetVoxelMidpoint() const	EndoMesh	virtual
vGetVoxelVolume() const	EndoMesh	virtual
voxelVolOut()	ChemCompt	static
vPower_	EndoMesh	private
vScale_	EndoMesh	private
vSetVolumeNotRates(double volume)	EndoMesh	virtual
~ChemCompt()	ChemCompt	virtual
~EndoMesh()	EndoMesh
~MeshCompt()	MeshCompt