File List

Here is a list of all files with brief descriptions:

[detail level 123]

moose-core
basecode
Cinfo.cpp
Cinfo.h
consts.cpp
Conv.h
DataElement.cpp
DataElement.h
DestFinfo.cpp
DestFinfo.h
Dinfo.h
doubleEq.cpp
doubleEq.h
Element.cpp
Element.h
ElementValueFinfo.h
EpFunc.cpp
EpFunc.h
Eref.cpp
Eref.h
FieldElement.cpp
FieldElement.h
FieldElementFinfo.cpp
FieldElementFinfo.h
Finfo.cpp
Finfo.h
FuncOrder.h
global.cpp
global.h
GlobalDataElement.cpp
GlobalDataElement.h
header.h
HopFunc.cpp
HopFunc.h
Id.cpp
Id.h
LocalDataElement.cpp
LocalDataElement.h
LookupElementValueFinfo.h
LookupValueFinfo.h
main.cpp
MsgDigest.h
MsgElement.h
MsgFuncBinding.h
ObjId.cpp
ObjId.h
OpFunc.h
OpFuncBase.cpp
OpFuncBase.h
PrepackedBuffer.cpp
PrepackedBuffer.h
ProcInfo.h
ProcOpFunc.h
SetGet.cpp
SetGet.h
SharedFinfo.cpp
SharedFinfo.h
SparseMatrix.cpp
SparseMatrix.h
SrcFinfo.cpp
SrcFinfo.h
testAsync.cpp
ValueFinfo.cpp
ValueFinfo.h
biophysics
CaConc.cpp
CaConc.h
CaConcBase.cpp
CaConcBase.h
ChanBase.cpp
ChanBase.h
ChanCommon.cpp
ChanCommon.h
Compartment.cpp
Compartment.h
CompartmentBase.cpp
CompartmentBase.h
CompartmentDataHolder.cpp
CompartmentDataHolder.h
DifBuffer.cpp
DifBuffer.h
DifBufferBase.cpp
DifBufferBase.h
DifShell.cpp
DifShell.h
DifShellBase.cpp
DifShellBase.h
GapJunction.cpp
GapJunction.h
HHChannel.cpp
HHChannel.h
HHChannel2D.cpp
HHChannel2D.h
HHChannelBase.cpp
HHChannelBase.h
HHGate.cpp
HHGate.h
HHGate2D.cpp
HHGate2D.h
IntFire.cpp
IntFire.h
IzhikevichNrn.cpp
IzhikevichNrn.h
Leakage.cpp
Leakage.h
MarkovChannel.cpp
MarkovChannel.h
MarkovGslSolver.cpp
MarkovGslSolver.h
MarkovRateTable.cpp
MarkovRateTable.h
MarkovSolver.cpp
MarkovSolver.h
MarkovSolverBase.cpp
MarkovSolverBase.h
MatrixOps.cpp
MatrixOps.h
MgBlock.cpp
MgBlock.h
MMPump.cpp
MMPump.h
Nernst.cpp
Nernst.h
Neuron.cpp
Neuron.h
NMDAChan.cpp
NMDAChan.h
RandSpike.cpp
RandSpike.h
ReadCell.cpp
ReadCell.h
ReadSwc.cpp
ReadSwc.h
SpikeGen.cpp
SpikeGen.h
SpikeRingBuffer.cpp
SpikeRingBuffer.h
Spine.cpp
Spine.h
SwcSegment.cpp
SwcSegment.h
SymCompartment.cpp
SymCompartment.h
SynChan.cpp
SynChan.h
testBiophysics.cpp
VClamp.cpp
VClamp.h
VectorTable.cpp
VectorTable.h
builtins
Arith.cpp
Arith.h
Func.cpp
Func.h
Function.cpp
Function.h
Group.cpp
Group.h
HDF5DataWriter.cpp
HDF5DataWriter.h
HDF5WriterBase.cpp
HDF5WriterBase.h
InputVariable.cpp
InputVariable.h
Interpol.cpp
Interpol.h
Interpol2D.cpp
Interpol2D.h
Mstring.cpp
Mstring.h
NSDFWriter.cpp
NSDFWriter.h
SpikeStats.cpp
SpikeStats.h
Stats.cpp
Stats.h
StimulusTable.cpp
StimulusTable.h
Streamer.cpp
Streamer.h
StreamerBase.cpp
StreamerBase.h
Table.cpp
Table.h
TableBase.cpp
TableBase.h
testBuiltins.cpp
testNSDF.cpp
TimeTable.cpp
TimeTable.h
Variable.cpp
Variable.h
device
DiffAmp.cpp
DiffAmp.h
PIDController.cpp
PIDController.h
PulseGen.cpp
PulseGen.h
RC.cpp
RC.h
diffusion
ConcChanInfo.h
DiffJunction.h
DiffPoolVec.cpp
DiffPoolVec.h
Dsolve.cpp
Dsolve.h
FastMatrixElim.cpp
FastMatrixElim.h
standaloneTestFastElim.cpp
testDiffusion.cpp
hsolve
Cell.cpp
Cell.h
HinesMatrix.cpp
HinesMatrix.h
HSolve.cpp
HSolve.h
HSolveActive.cpp
HSolveActive.h
HSolveActiveSetup.cpp
HSolveInterface.cpp
HSolvePassive.cpp
HSolvePassive.h
HSolveStruct.cpp
HSolveStruct.h
HSolveUtils.cpp
HSolveUtils.h
RateLookup.cpp
RateLookup.h
testHSolve.cpp
TestHSolve.h
ZombieCaConc.cpp
ZombieCaConc.h
ZombieCompartment.cpp
ZombieCompartment.h
ZombieHHChannel.cpp
ZombieHHChannel.h
intfire
AdExIF.cpp
AdExIF.h
AdThreshIF.cpp
AdThreshIF.h
ExIF.cpp
ExIF.h
IntFireBase.cpp
IntFireBase.h
IzhIF.cpp
IzhIF.h
LIF.cpp
LIF.h
QIF.cpp
QIF.h
testIntFire.cpp
kinetics
BufPool.cpp
BufPool.h
ConcChan.cpp
ConcChan.h
CplxEnzBase.cpp
CplxEnzBase.h
Enz.cpp
Enz.h
EnzBase.cpp
EnzBase.h
lookupVolumeFromMesh.cpp
lookupVolumeFromMesh.h
MMenz.cpp
MMenz.h
Pool.cpp
Pool.h
PoolBase.cpp
PoolBase.h
Reac.cpp
Reac.h
ReacBase.cpp
ReacBase.h
ReadCspace.cpp
ReadCspace.h
ReadKkit.cpp
ReadKkit.h
Species.cpp
Species.h
testKinetics.cpp
WriteKkit.cpp
ksolve
BoostSys.cpp
BoostSys.h
FuncRateTerm.h
FuncTerm.cpp
FuncTerm.h
Gsolve.cpp
Gsolve.h
GssaSystem.h
GssaVoxelPools.cpp
GssaVoxelPools.h
KinSparseMatrix.cpp
KinSparseMatrix.h
Ksolve.cpp
Ksolve.h
NonlinearSystem.h
OdeSystem.h
RateTerm.cpp
RateTerm.h
SteadyStateBoost.cpp
SteadyStateBoost.h
SteadyStateGsl.cpp
SteadyStateGsl.h
Stoich.cpp
Stoich.h
testKsolve.cpp
VoxelPools.cpp
VoxelPools.h
VoxelPoolsBase.cpp
VoxelPoolsBase.h
XferInfo.h
ZombieBufPool.cpp
ZombieBufPool.h
ZombieEnz.cpp
ZombieEnz.h
ZombieFunction.cpp
ZombieFunction.h
ZombieMMenz.cpp
ZombieMMenz.h
ZombiePool.cpp
ZombiePool.h
ZombiePoolInterface.cpp
ZombiePoolInterface.h
ZombieReac.cpp
ZombieReac.h
mesh
Boundary.cpp
Boundary.h
ChemCompt.cpp
ChemCompt.h
CubeMesh.cpp
CubeMesh.h
CylBase.cpp
CylBase.h
CylMesh.cpp
CylMesh.h
EndoMesh.cpp
EndoMesh.h
MeshCompt.cpp
MeshCompt.h
MeshEntry.cpp
MeshEntry.h
NeuroMesh.cpp
NeuroMesh.h
NeuroNode.cpp
NeuroNode.h
PsdMesh.cpp
PsdMesh.h
SpineEntry.cpp
SpineEntry.h
SpineMesh.cpp
SpineMesh.h
Stencil.cpp
Stencil.h
testMesh.cpp
VoxelJunction.h
mpi
PostMaster.cpp
PostMaster.h
proc.cpp
proc1.cpp
proc2.cpp
proc3.cpp
proc4.cpp
proc5.cpp
testMpi.cpp
msg
DiagonalMsg.cpp
DiagonalMsg.h
Msg.cpp
Msg.h
OneToAllMsg.cpp
OneToAllMsg.h
OneToOneDataIndexMsg.cpp
OneToOneDataIndexMsg.h
OneToOneMsg.cpp
OneToOneMsg.h
SingleMsg.cpp
SingleMsg.h
SparseMsg.cpp
SparseMsg.h
testMsg.cpp
pymoose
melement.cpp
mfield.cpp
moosemodule.cpp
moosemodule.h
pymooseinit.cpp
PyRun.cpp
PyRun.h
test_moosemodule.cpp
vec.cpp
randnum
Definitions.h
Distributions.h
NormalDistribution.hpp
RNG.h
test_normal_dist.cpp
scheduling
Clock.cpp
Clock.h
testScheduling.cpp
testScheduling.h
shell
LoadModels.cpp
LoadModels.h
Neutral.cpp
Neutral.h
SaveModels.cpp
Shell.cpp
Shell.h
ShellCopy.cpp
ShellThreads.cpp
testShell.cpp
Wildcard.cpp
Wildcard.h
signeur
Adaptor.cpp
Adaptor.h
testSigNeur.cpp
synapse
GraupnerBrunel2012CaPlasticitySynHandler.cpp
GraupnerBrunel2012CaPlasticitySynHandler.h
RollingMatrix.cpp
RollingMatrix.h
SeqSynHandler.cpp
SeqSynHandler.h
SimpleSynHandler.cpp
SimpleSynHandler.h
STDPSynapse.cpp
STDPSynapse.h
STDPSynHandler.cpp
STDPSynHandler.h
Synapse.cpp
Synapse.h
SynEvent.h
SynHandlerBase.cpp
SynHandlerBase.h
testSynapse.cpp
utility
Annotator.cpp
Annotator.h
cnpy.cpp
cnpy.hpp
current_function.hpp
matrix_util.cpp
matrix_util.h
numutil.cpp
numutil.h
print_function.hpp
setupenv.cpp
simple_assert.hpp
simple_logger.hpp
simple_test.hpp
strutil.cpp
strutil.h
testing_macros.hpp
types.cpp
utility.h
Vec.cpp
Vec.h