MarkovRateTable.cpp File Reference

#include <iomanip>
#include "header.h"
#include "VectorTable.h"
#include "../builtins/Interpol2D.h"
#include "MarkovRateTable.h"

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Functions
static SrcFinfo1< vector < vector< double > > > *	instRatesOut ()
istream &	operator>> (istream &in, MarkovRateTable &rateTable)

Variables
static const Cinfo *	MarkovRateTableCinfo = MarkovRateTable::initCinfo()

Function Documentation

static SrcFinfo1< vector< vector< double > > >* instRatesOut ( )

static

Definition at line 17 of file MarkovRateTable.cpp.

Referenced by MarkovRateTable::initCinfo(), MarkovRateTable::process(), and MarkovRateTable::reinit().

{
    static SrcFinfo1< vector< vector< double > > > instRatesOut(
        "instratesOut",
        "Sends out instantaneous rate information of varying transition rates"
        "at each time step.");

    return &instRatesOut;
}

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istream& operator>>	(	istream &	in,
		MarkovRateTable &	rateTable
	)

Definition at line 568 of file MarkovRateTable.cpp.

References MarkovRateTable::int2dTables_, MarkovRateTable::isRate1d(), MarkovRateTable::isRate2d(), MarkovRateTable::ligandConc_, MarkovRateTable::size_, MarkovRateTable::useLigandConc_, MarkovRateTable::Vm_, and MarkovRateTable::vtTables_.

{
    for ( unsigned int i = 0; i < rateTable.size_; ++i )
    {
        for ( unsigned int j = 0; j < rateTable.size_; ++j )
        {
            if ( rateTable.isRate1d( i, j ) )
                in >> *rateTable.vtTables_[i][j];
        }
    }

    for ( unsigned int i = 0; i < rateTable.size_; ++i )
    {
        for ( unsigned int j = 0; j < rateTable.size_; ++j )
        {
            if ( rateTable.isRate2d( i, j ) )
                in >> *rateTable.int2dTables_[i][j];
        }
    }

    for ( unsigned int i = 0; i < rateTable.size_; ++i )
    {
        for ( unsigned int j = 0; j < rateTable.size_; ++j )
            in >> rateTable.useLigandConc_[i][j];
    }
    in >> rateTable.Vm_;
    in >> rateTable.ligandConc_;
    in >> rateTable.size_;

    return in;
}

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Variable Documentation

const Cinfo* MarkovRateTableCinfo = MarkovRateTable::initCinfo()

static

Definition at line 168 of file MarkovRateTable.cpp.

Referenced by MarkovRateTable::initCinfo().