CompartmentDataHolder.cpp

Go to the documentation of this file.

/**********************************************************************
** This program is part of 'MOOSE', the
** Messaging Object Oriented Simulation Environment.
**           Copyright (C) 2003-2007 Upinder S. Bhalla. and NCBS
** It is made available under the terms of the
** GNU Lesser General Public License version 2.1
** See the file COPYING.LIB for the full notice.
**********************************************************************/
#include "header.h"
#include "CompartmentBase.h"
#include "CompartmentDataHolder.h"
// static func

using namespace moose;

CompartmentDataHolder::CompartmentDataHolder()
        :
            Cm_( 1.0 ),
            Ra_( 1.0 ),
            Rm_( 1.0 ),
            Em_( -0.06 ),
            initVm_( -0.06 ),
            inject_( 0.0 ),

            diameter_( 1.0e-6 ),
            length_( 100.0e-6 ),
            x0_( 0.0 ),
            y0_( 0.0 ),
            z0_( 0.0 ),
            x_( 0.0 ),
            y_( 0.0 ),
            z_( 0.0 )
{;}

void CompartmentDataHolder::readData( const CompartmentBase* cb, const Eref& er )
{
        Cm_ = cb->getCm( er );
        Rm_ = cb->getRm( er );
        Ra_ = cb->getRa( er );
        Em_ = cb->getEm( er );
        initVm_ = cb->getInitVm( er );
        inject_ = cb->getInject( er );

        x0_ = cb->getX0();
        y0_ = cb->getY0();
        z0_ = cb->getZ0();
        x_ = cb->getX();
        y_ = cb->getY();
        z_ = cb->getZ();
        length_ = cb->getLength();
        diameter_ = cb->getDiameter();
}


void CompartmentDataHolder::writeData( CompartmentBase* cb, const Eref& er )
{
        cb->setCm( er, Cm_ );
        cb->setRm( er, Rm_ );
        cb->setRa( er, Ra_ );
        cb->setEm( er, Em_ );
        cb->setInitVm( er, initVm_ );
        cb->setInject( er, inject_ );

        cb->setX0( x0_ );
        cb->setY0( y0_ );
        cb->setZ0( z0_ );
        cb->setX( x_ );
        cb->setY( y_ );
        cb->setZ( z_ );
        cb->setLength( length_ );
        cb->setDiameter( diameter_ );
}