83 void printMol(
Id id,
double conc,
double concinit,
double vol);
87 void printEnz(
Id id,
Id cplx,
double k1,
double k2,
double k3);
90 const string& modelname,
Id pa,
const string& solverClass );
96 const char* name,
int e,
int s,
int p,
int p2 = 0);
130 #endif // _READCSPACE_H
static const double DEFAULT_RATE
vector< CspaceReacInfo > reaclist_
void printMol(Id id, double conc, double concinit, double vol)
CspaceReacInfo(const string &name, double r1, double r2)
bool operator<(const CspaceReacInfo &other) const
vector< CspaceMolInfo > mollist_
void expandEnzyme(const char *name, int e, int s, int p, int p2=0)
static const double DEFAULT_KM
void build(const char *name)
Id readModelString(const string &model, const string &modelname, Id pa, const string &solverClass)
void makeMolecule(char name)
void makePlots(double plotdt)
void expandReaction(const char *name, int nm1)
void printEnz(Id id, Id cplx, double k1, double k2, double k3)
static const bool USE_PIPE
void printReac(Id id, double kf, double kb)
bool operator<(const CspaceMolInfo &other) const
static const double DEFAULT_CONC
CspaceMolInfo(char name, double conc)
vector< unsigned int > molseq_
static const double SCALE
vector< double > molparms_