DiffPoolVec.h

Go to the documentation of this file.

/**********************************************************************
** This program is part of 'MOOSE', the
** Messaging Object Oriented Simulation Environment.
**           Copyright (C) 2003-2012 Upinder S. Bhalla. and NCBS
** It is made available under the terms of the
** GNU Lesser General Public License version 2.1
** See the file COPYING.LIB for the full notice.
**********************************************************************/

#ifndef _DIFF_POOL_VEC_H
#define _DIFF_POOL_VEC_H

class DiffPoolVec
{
    public:
        DiffPoolVec();
        void process();
        void reinit();
        void advance( double dt );
        double getNinit( unsigned int vox ) const;
        void setNinit( unsigned int vox, double value );
        double getN( unsigned int vox ) const;
        void setN( unsigned int vox, double value );
        double getPrev( unsigned int vox ) const;

        double getDiffConst() const;
        void setDiffConst( double value );

        double getMotorConst() const;
        void setMotorConst( double value );

        void setNumVoxels( unsigned int num );
        unsigned int getNumVoxels() const;

        void setId( unsigned int id );
        unsigned int getId() const;

        const vector< double >& getNvec() const;
        void setNvec( const vector< double >& n );
        void setNvec( unsigned int start, unsigned int num,
                        vector< double >::const_iterator q );
        void setPrevVec(); 
        void setOps( const vector< Triplet< double > >& ops_,
                const vector< double >& diagVal_ ); 

        // static const Cinfo* initCinfo();
    private:
        unsigned int id_; 
        vector< double > n_; 
        vector< double > prev_; 
        vector< double > nInit_; 
        double diffConst_; 
        double motorConst_; 
        vector< Triplet< double > > ops_;
        vector< double > diagVal_;
};

#endif // _DIFF_POOL_VEC_H