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KinSparseMatrix Member List

This is the complete list of members for KinSparseMatrix, including all inherited members.

addRow(unsigned int rowNum, const vector< int > &row)SparseMatrix< int >inline
addRow(unsigned int rowNum, const vector< int > &entry, const vector< unsigned int > &colIndexArg)SparseMatrix< int >inline
clear()SparseMatrix< int >inline
colIndex() constSparseMatrix< int >inline
colIndex_SparseMatrix< int >protected
computeRowRate(unsigned int row, const vector< double > &v) const KinSparseMatrix
fireReac(unsigned int reacIndex, vector< double > &S, double direction) const KinSparseMatrix
get(unsigned int row, unsigned int column) constSparseMatrix< int >inline
getColumn(unsigned int col, vector< int > &entry, vector< unsigned int > &rowIndex) constSparseMatrix< int >inline
getGillespieDependence(unsigned int row, vector< unsigned int > &cols) const KinSparseMatrix
getRow(unsigned int row, const int **entry, const unsigned int **colIndex) constSparseMatrix< int >inline
getRow(unsigned int row, vector< int > &e, vector< unsigned int > &c) constSparseMatrix< int >inline
matrixEntry() constSparseMatrix< int >inline
N_SparseMatrix< int >protected
nColumns() constSparseMatrix< int >inline
ncolumns_SparseMatrix< int >protected
nEntries() constSparseMatrix< int >inline
nRows() constSparseMatrix< int >inline
nrows_SparseMatrix< int >protected
pairFill(const vector< unsigned int > &row, const vector< unsigned int > &col, intvalue)SparseMatrix< int >inline
print() constSparseMatrix< int >inline
printInternal() constSparseMatrix< int >inline
printTriplet(const vector< Triplet< int > > &t)SparseMatrix< int >inline
reorderColumns(const vector< unsigned int > &colMap)SparseMatrix< int >inline
rowStart() constSparseMatrix< int >inline
rowStart_SparseMatrix< int >protected
rowTruncated_KinSparseMatrixprivate
set(unsigned int row, unsigned int column, intvalue)SparseMatrix< int >inline
setSize(unsigned int nrows, unsigned int ncolumns)SparseMatrix< int >inline
SparseMatrix()SparseMatrix< int >inline
SparseMatrix(unsigned int nrows, unsigned int ncolumns)SparseMatrix< int >inline
transpose()SparseMatrix< int >inline
tripletFill(const vector< unsigned int > &row, const vector< unsigned int > &col, const vector< int > &z, bool retainSize=false)SparseMatrix< int >inline
truncateRow(unsigned int maxColumnIndex)KinSparseMatrix
unset(unsigned int row, unsigned int column)SparseMatrix< int >inline