SpineMesh Member List

This is the complete list of members for SpineMesh, including all inherited members.

addRow(unsigned int index, const vector< double > &entry, const vector< unsigned int > &colIndex)	MeshCompt
area_	SpineMesh	private
buildDefaultMesh(const Eref &e, double volume, unsigned int numEntries)	ChemCompt
buildJunction(ChemCompt *other, vector< VoxelJunction > &ret)	ChemCompt
buildStencil()	SpineMesh
ChemCompt()	ChemCompt
clearExtendedMeshEntryVolume()	MeshCompt	virtual
distance(double x, double y, double z)	ChemCompt	static
extendedMeshEntryVolume(unsigned int fid) const	SpineMesh	virtual
extendStencil(const ChemCompt *other, const vector< VoxelJunction > &vj)	MeshCompt	virtual
flipRet(vector< VoxelJunction > &ret) const	ChemCompt
getChildConcs(const Eref &e, vector< double > &childConcs) const	ChemCompt
getCoordinates(unsigned int fid) const	SpineMesh	virtual
getDiffusionArea(unsigned int fid) const	SpineMesh	virtual
getDiffusionScaling(unsigned int fid) const	SpineMesh	virtual
getDimensions() const	ChemCompt
getElecComptMap() const	SpineMesh
getEndVoxelInCompt() const	SpineMesh
getEntireVolume(const Eref &e) const	ChemCompt
getIsMembraneBound() const	ChemCompt
getMeshDimensions(unsigned int fid) const	SpineMesh	virtual
getMeshEntryVolume(unsigned int fid) const	SpineMesh	virtual
getMeshType(unsigned int fid) const	SpineMesh	virtual
getMethod() const	ChemCompt
getNeighbors(unsigned int fid) const	MeshCompt	virtual
getNeuronVoxel() const	SpineMesh
getNumEntries() const	ChemCompt
getOneVoxelVolume(const Eref &e, unsigned int voxel) const	ChemCompt
getParentVoxel() const	SpineMesh	virtual
getStartVoxelInCompt() const	SpineMesh
getStencil() const	MeshCompt
getStencilIndex(unsigned int row) const	ChemCompt
getStencilRate(unsigned int row) const	ChemCompt
getStencilRow(unsigned int meshIndex, const double **entry, const unsigned int **colIndex) const	MeshCompt	virtual
getVoxelArea() const	SpineMesh	virtual
getVoxelLength() const	SpineMesh	virtual
getVoxelMidpoint() const	ChemCompt
getVoxelVolume() const	ChemCompt
handleNodeInfo(const Eref &e, unsigned int numNodes, unsigned int numThreads)	ChemCompt
handleSpineList(const Eref &e, vector< Id > shaft, vector< Id > head, vector< unsigned int > parentVoxel)	SpineMesh
indexToSpace(unsigned int index, double &x, double &y, double &z) const	SpineMesh	virtual
initCinfo()	SpineMesh	static
innerBuildDefaultMesh(const Eref &e, double volume, unsigned int numEntries)	SpineMesh	virtual
innerGetDimensions() const	SpineMesh	virtual
innerGetNumEntries() const	SpineMesh	virtual
innerGetStencilRate(unsigned int row) const	MeshCompt	virtual
innerHandleNodeInfo(const Eref &e, unsigned int numNodes, unsigned int numThreads)	SpineMesh	virtual
innerResetStencil()	MeshCompt	virtual
innerSetNumEntries(unsigned int n)	SpineMesh	virtual
length_	SpineMesh	private
lookupEntry(unsigned int index)	ChemCompt
matchCubeMeshEntries(const ChemCompt *other, vector< VoxelJunction > &ret) const	SpineMesh
matchMeshEntries(const ChemCompt *other, vector< VoxelJunction > &ret) const	SpineMesh	virtual
matchNeuroMeshEntries(const ChemCompt *other, vector< VoxelJunction > &ret) const	SpineMesh
matchSpineMeshEntries(const ChemCompt *other, vector< VoxelJunction > &ret) const	SpineMesh
MeshCompt()	MeshCompt
nearest(double x, double y, double z, unsigned int &index) const	SpineMesh	virtual
resetStencil()	ChemCompt
setChildConcs(const Eref &e, const vector< double > &childConcs, unsigned int start) const	ChemCompt
setEntireVolume(const Eref &e, double volume)	ChemCompt
setIsMembraneBound(bool v)	ChemCompt
setMeshEntryVolume(unsigned int fid, double volume)	SpineMesh	virtual
setMethod(string method)	ChemCompt
setNumEntries(unsigned int num)	ChemCompt
setOneVoxelVolume(const Eref &e, unsigned int voxel, double volume)	ChemCompt
setStencilSize(unsigned int numRows, unsigned int numCols)	MeshCompt
setVolumeNotRates(double volume)	ChemCompt
SpineMesh()	SpineMesh
SpineMesh(const SpineMesh &other)	SpineMesh
spines() const	SpineMesh
spines_	SpineMesh	private
surfaceGranularity_	SpineMesh	private
transmitChange(const Eref &e)	SpineMesh
updateCoords()	SpineMesh
vGetEntireVolume() const	SpineMesh	virtual
vGetVoxelMidpoint() const	SpineMesh	virtual
vGetVoxelVolume() const	SpineMesh	virtual
voxelVolOut()	ChemCompt	static
vs_	SpineMesh	private
vSetVolumeNotRates(double volume)	SpineMesh	virtual
~ChemCompt()	ChemCompt	virtual
~MeshCompt()	MeshCompt
~SpineMesh()	SpineMesh