MOOSE - Multiscale Object Oriented Simulation Environment
|
This is the complete list of members for VoxelPoolsBase, including all inherited members.
addProxyTransferIndex(unsigned int comptIndex, unsigned int transferIndex) | VoxelPoolsBase | |
addProxyVoxy(unsigned int comptIndex, Id comptId, unsigned int voxel) | VoxelPoolsBase | |
backwardReacVolumeFactor(unsigned int i, double volume) | VoxelPoolsBase | |
filterCrossRateTerms(const vector< Id > &offSolverReacs, const vector< pair< Id, Id > > &offSolverReacCompts) | VoxelPoolsBase | |
forwardReacVolumeFactor(unsigned int i, double volume) | VoxelPoolsBase | |
getDiffConst(unsigned int) const | VoxelPoolsBase | |
getN(unsigned int) const | VoxelPoolsBase | |
getNinit(unsigned int) const | VoxelPoolsBase | |
getVolume() const | VoxelPoolsBase | |
getXreacScaleProducts(unsigned int i) const | VoxelPoolsBase | |
getXreacScaleSubstrates(unsigned int i) const | VoxelPoolsBase | |
hasXfer(unsigned int comptIndex) const | VoxelPoolsBase | |
isVoxelJunctionPresent(Id i1, Id i2) const | VoxelPoolsBase | |
print() const | VoxelPoolsBase | |
proxyComptMap_ | VoxelPoolsBase | private |
proxyPoolVoxels_ | VoxelPoolsBase | private |
proxyTransferIndex_ | VoxelPoolsBase | private |
rates_ | VoxelPoolsBase | protected |
reinit() | VoxelPoolsBase | |
resetXreacScale(unsigned int size) | VoxelPoolsBase | |
resizeArrays(unsigned int totNumPools) | VoxelPoolsBase | |
S() const | VoxelPoolsBase | |
S_ | VoxelPoolsBase | private |
scaleVolsBufsRates(double ratio, const Stoich *stoichPtr) | VoxelPoolsBase | |
setDiffConst(unsigned int, double v) | VoxelPoolsBase | |
setN(unsigned int i, double v) | VoxelPoolsBase | |
setNinit(unsigned int, double v) | VoxelPoolsBase | |
setVolume(double vol) | VoxelPoolsBase | |
setVolumeAndDependencies(double vol) | VoxelPoolsBase | virtual |
Sinit() const | VoxelPoolsBase | |
Sinit_ | VoxelPoolsBase | private |
size() const | VoxelPoolsBase | |
stoichPtr_ | VoxelPoolsBase | protected |
Svec() | VoxelPoolsBase | |
updateAllRateTerms(const vector< RateTerm * > &rates, unsigned int numCoreRates)=0 | VoxelPoolsBase | pure virtual |
updateRateTerms(const vector< RateTerm * > &rates, unsigned int numCoreRates, unsigned int index)=0 | VoxelPoolsBase | pure virtual |
varS() | VoxelPoolsBase | |
varSinit() | VoxelPoolsBase | |
volume_ | VoxelPoolsBase | private |
VoxelPoolsBase() | VoxelPoolsBase | |
xferIn(const vector< unsigned int > &poolIndex, const vector< double > &values, const vector< double > &lastValues, unsigned int voxelIndex) | VoxelPoolsBase | |
xferInOnlyProxies(const vector< unsigned int > &poolIndex, const vector< double > &values, unsigned int numProxyPools, unsigned int voxelIndex) | VoxelPoolsBase | |
xferOut(unsigned int voxelIndex, vector< double > &values, const vector< unsigned int > &poolIndex) | VoxelPoolsBase | |
xReacScaleProducts_ | VoxelPoolsBase | private |
xReacScaleSubstrates_ | VoxelPoolsBase | private |
~VoxelPoolsBase() | VoxelPoolsBase | virtual |