Rdesigneur Examples¶How to run these examples
Building Chemical-Electrical Signalling Models¶
Building a compartment¶
This illustrates the use of rdesigneur to build a simple dendrite with spines, and to confirm that the chemical contents of the spines align with the electrical. Just a single molecule Ca is involved. It diffuses and we plot the distribution. It causes 'inject' of the relevant compartment to rise.
Inserting Spines and viewing¶
This example illustrates loading a model from an SWC file, inserting spines, and viewing it.
Proceeding with Spines¶
This illustrates the use of rdesigneur to build a simple dendrite with spines, and then to resize them using spine fields. These are the fields that would be changed dynamically in a simulation with reactions that affect spine geometry.
Print to 2 sig fig