nuParser Class Reference

Inheritance diagram for nuParser:

Collaboration diagram for nuParser:

Public Types
enum	valArgs {   EXPR, P, G, EL,   LEN, DIA, MAXP, MAXG,   MAXL, X, Y, Z,   OLDVAL }
	Defines the order of arguments in the val array. More...

Public Member Functions
double	eval (vector< double >::const_iterator arg0)
	nuParser (const string &expr)

Static Public Member Functions
static double	H (double arg)

Public Attributes
double	dia
double	g
double	L
double	len
double	maxG
double	maxL
double	maxP
double	oldVal
double	p
bool	useOldVal
double	x
double	y
double	z

Static Public Attributes
static const unsigned int	numVal = 13

Detailed Description

Definition at line 24 of file Neuron.cpp.

Member Enumeration Documentation

enum nuParser::valArgs

Defines the order of arguments in the val array.

Enumerator
EXPR
P
G
EL
LEN
DIA
MAXP
MAXG
MAXL
X
Y
Z
OLDVAL

Definition at line 62 of file Neuron.cpp.

                 { EXPR, P, G, EL, LEN, DIA, MAXP, MAXG, MAXL,
                   X, Y, Z, OLDVAL
                 };

Constructor & Destructor Documentation

nuParser::nuParser ( const string &  expr )

inline

Definition at line 27 of file Neuron.cpp.

References dia, g, H(), L, len, maxG, maxL, maxP, oldVal, p, useOldVal, x, y, and z.

                                  :
        mu::Parser(),
        p(0.0), // geometrical path distance wound through dendrite
        g(0.0), // geometrical path distance direct from soma.
        L(0.0), // electrical distance arg
        len(0.0), // Length of compt in metres
        dia(0.0), // Diameter of compt in metres
        maxP(0.0), // Maximum value of *p* for this neuron.
        maxG(0.0), // Maximum value of *g* for this neuron.
        maxL(0.0), // Maximum value of *L* for this neuron.
        x(0.0), // X position of segment.
        y(0.0), // Y position of segment.
        z(0.0), // Z position of segment.
        oldVal(0.0), // Original value of field, if needed.
        useOldVal( false ) // is the 'orig' field needed?
    {
        DefineVar( "p", &p );
        DefineVar( "g", &g );
        DefineVar( "L", &L );
        DefineVar( "len", &len );
        DefineVar( "dia", &dia );
        DefineVar( "maxP", &maxP );
        DefineVar( "maxG", &maxG );
        DefineVar( "maxL", &maxL );
        DefineVar( "x", &x );
        DefineVar( "y", &y );
        DefineVar( "z", &z );
        DefineVar( "oldVal", &oldVal );
        DefineFun( "H", nuParser::H );
        if ( expr.find( "oldVal" ) != string::npos )
            useOldVal = true;
        SetExpr( expr );
    }

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Member Function Documentation

double nuParser::eval ( vector< double >::const_iterator  arg0 )

inline

Definition at line 71 of file Neuron.cpp.

References DIA, dia, EL, G, g, L, LEN, len, MAXG, maxG, MAXL, maxL, MAXP, maxP, OLDVAL, oldVal, P, p, X, x, Y, y, Z, and z.

Referenced by Neuron::evalExprForElist(), makeAngleDistrib(), makeSizeDistrib(), Neuron::makeSpacingDistrib(), setCompartmentParams(), and setMechParams().

    {
        p = *(arg0 + nuParser::P );
        g = *(arg0 + nuParser::G );
        L = *(arg0 + nuParser::EL );
        len = *(arg0 + nuParser::LEN );
        dia = *(arg0 + nuParser::DIA );
        maxP = *(arg0 + nuParser::MAXP );
        maxG = *(arg0 + nuParser::MAXG );
        maxL = *(arg0 + nuParser::MAXL );
        x = *(arg0 + nuParser::X );
        y = *(arg0 + nuParser::Y );
        z = *(arg0 + nuParser::Z );
        oldVal = *(arg0 + nuParser::OLDVAL );
        return Eval();
    }

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static double nuParser::H ( double  arg )

inlinestatic

Definition at line 66 of file Neuron.cpp.

Referenced by nuParser().

    {
        return ( arg > 0.0);
    }

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Member Data Documentation

double nuParser::dia

Definition at line 93 of file Neuron.cpp.

Referenced by eval(), and nuParser().

double nuParser::g

Definition at line 90 of file Neuron.cpp.

Referenced by eval(), and nuParser().

double nuParser::L

Definition at line 91 of file Neuron.cpp.

Referenced by eval(), and nuParser().

double nuParser::len

Definition at line 92 of file Neuron.cpp.

Referenced by eval(), and nuParser().

double nuParser::maxG

Definition at line 95 of file Neuron.cpp.

Referenced by eval(), and nuParser().

double nuParser::maxL

Definition at line 96 of file Neuron.cpp.

Referenced by eval(), and nuParser().

double nuParser::maxP

Definition at line 94 of file Neuron.cpp.

Referenced by eval(), and nuParser().

const unsigned int nuParser::numVal = 13

static

Definition at line 88 of file Neuron.cpp.

Referenced by buildFromProto(), Neuron::evalExprForElist(), Neuron::getExprElist(), makeAngleDistrib(), makeSizeDistrib(), Neuron::makeSpacingDistrib(), setCompartmentParams(), and setMechParams().

double nuParser::oldVal

Definition at line 100 of file Neuron.cpp.

Referenced by eval(), and nuParser().

double nuParser::p

Definition at line 89 of file Neuron.cpp.

Referenced by eval(), and nuParser().

bool nuParser::useOldVal

Definition at line 101 of file Neuron.cpp.

Referenced by nuParser().

double nuParser::x

Definition at line 97 of file Neuron.cpp.

Referenced by eval(), and nuParser().

double nuParser::y

Definition at line 98 of file Neuron.cpp.

Referenced by eval(), and nuParser().

double nuParser::z

Definition at line 99 of file Neuron.cpp.

Referenced by eval(), and nuParser().

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The documentation for this class was generated from the following file:

• moose-core/biophysics/Neuron.cpp